Publications
Retrodicting chaotic dynamical systems: an algorithmic information approach
Submitted (2025)
K. Dingle, B. Hamzi, M. Hutter, H. Owhadi
Bounding phenotype transition probabilities via conditional complexity
Submitted (2024)
K. Dingle, P. Hagolani, R. Zimm, M. Umar, S. O'Sullivan, A. Louis
Exploring simplicity bias in 1D dynamical systems
Entropy 26(5) 426 (2024)
K. Dingle, M. Alaskandarani, B. Hamzi, A. Louis
Simplicity bias, algorithmic probability, and the random logistic map
Physica D: Nonlinear Phenomena 134160 (2024)
B. Hamzi and K. Dingle
Bounds on learning with power-law priors
Bulletin of the American Physical Society (2024)
S. Ridout, I. Nemenman, A. Louis, C. Mingard, R. Grabarczyk, K. Dingle, G. Valle Pérez, C. London
Is evolution predictable?
The ScienceBreaker (2023)
K. Dingle
[This is a "popular science" article, aimed at the general public]
Maximum mutational robustness in genotype-phenotype maps follows a self-similar blancmange-like curve
Journal of the Royal Society Interface 20:204 (2023)
V. Mohanty, S. Greenbury, T. Sarkany, S. Narayanan, K. Dingle, S. Ahnert, and A. Louis
See also this Phys.org coverage of the paper
Nature favors simplicity and symmetry in biological forms
The ScienceBreaker 9 (2) (2023)
K. Dingle
[This is a "popular science" article, aimed at the general public]
Low complexity, low probability patterns and consequences for algorithmic probability applications
Complexity 9696075 (2023)
M. Alaskandarani and K. Dingle
Multiclass classification utilising an estimated algorithmic probability prior
Physica D: Nonlinear Phenomena 133713 (2023)
K. Dingle, P. Batlle, H. Owhadi
Random and natural non-coding RNA have similar structural motif patterns
but differ in bulge, loop, and bond counts
Life 13(3), 708 (2023)
F. Ghaddar and K. Dingle
Quantitative Analyses of Cytokine Profiles Reveal Hormone-Mediated Modulation
of Cytokine Profiles in Recurrent Spontaneous Miscarriage
Cytokine 164:156160 (2023)
K. Dingle, O. Kassem, F. Azizieh, G. AbdulHussain, R. Raghupathy
A Note on A Priori Forecasting and Simplicity Bias in Time Series
Physica A: Statistical Mechanics and its Applications 128339 (2023)
K. Dingle, R. Kamal, B. Hamzi
Predicting phenotype transition probabilities via conditional
algorithmic probability approximations
Journal of the Royal Society Interface 19:20220694 (2022)
K. Dingle, J. Novev, S. Ahnert, A. Louis
Fitness, Optima, and Simplicity
preprint (2022)
K. Dingle
Optima and Simplicity in Nature
preprint (2022)
K. Dingle
Reply to Ocklenburg et al: The interplay of developmental bias and natural selection
Proceedings of the National Academy of Science (PNAS) 119:28 (2022)
I. G. Johnston, K. Dingle, S. F. Greenbury, C. Q. Camargo, J. P. K. Doye, S. Ahnert, A. A. Louis
Symmetry and simplicity spontaneously emerge from the algorithmic nature of evolution
Proceedings of the National Academy of Science (PNAS) 119:11 (2022)
I. G. Johnston*, K. Dingle*, S. F. Greenbury, C. Q. Camargo, J. P. K. Doye, S. Ahnert, A. A. Louis
*= co-first authors
See also Oxford summary of the paper, and ScienceDaily, the New York Times, and Le Monde (in French), Editor's pick for Nature Reviews Physics
Phenotype bias determines how RNA structures occupy the morphospace of all possible shapes
Molecular Biology and Evolution Volume 39, Issue 1, msab280 (2022)
K. Dingle, F. Ghaddar, P. Sulc, A. A. Louis
Mechanistic modelling of COVID-19 and the impact of lockdowns on a short timescale
PLoS ONE 16(10):e0258084 (2021)
D. Ahmed, A. Ansari, M. Imran, K. Dingle, N. Ahmed, M. Bonsall
CytokineExplore: An online tool for statistical analysis of cytokine concentration datasets
Journal of Inflammation Research (2020) 13:401 - 410
O. Kassem, A. Al-Saleh, F. Azizieh, K. Dingle
*New* link to CytokineExplore tool website
Generic predictions of output probability based on complexities of inputs and outputs
Scientific Reports (Springer Nature) (2020) 10:4415
K. Dingle, G. Valle Perez, A. A. Louis
Multivariate comparison of cytokine profiles for normal and low bone density subjects
Diagnostics (2019) 9(4)
K. Dingle and F. Azizieh
Establishing a many-cytokine signature via multivariate anomaly detection
Scientific Reports (Springer Nature) (2019) 9:9684
K. Dingle, A. Zimek, F. Azizieh, A.R. Ansari
Input-output maps are strongly biased towards simple outputs
Nature Communications (2018) 9(761)
K. Dingle, C. Camargo, A. A. Louis
See also news article in Phys.org and Oxford blog post on simplicity bias
and Nature Physics commentary
Multivariate study of cytokine profiles in pregnancy complications
The American Journal of Reproductive Immunology (2018) 79(3) e12818
F. Azizieh, K. Dingle, K. Johnson, J. VanderPlas, R. Raghupathy, A. R. Ansari
(This paper was in the journal's top 20 downloaded articles)
Patterns of circulatory and peripheral blood mononuclear cytokines in rheumatoid arthritis
Rheumatology International (2017) 37(10), 1727-1734
F. Azizieh, K. Al Jarallah, D. Shehab, R. Gupta, K. Dingle, R. Raghupathy
(See also in BSR Rheumatology Conference (link))
Association of self-reported symptoms with serum levels of vitamin D and multivariate cytokine profile in healthy women
Journal of Inflammation Research Volume 2017:10 Pages 19-28
F. Azizieh, K. Alyahya, K. Dingle
The structure of the genotype-phenotype map strongly constrains the evolution of non-coding RNA.
Interface Focus (2015) 5 20150053
K. Dingle, S. Schaper and A. A. Louis
DPhil (PhD) thesis, Oxford University (2014)
Title: Probabilistic bias in genotype-phenotype maps
Keywords: information theory, biological evolution, mathematical biology, probability
Thesis supervisor: Ard A. Louis
Correlation of automorphism group size and topological properties with program-size complexity evaluations of graphs and complex networks.
Physica A: Statistical Mechanics and its Applications (2014) 404, 341-358
H. Zenil, F. Soler-Toscano, K. Dingle and A.A. Louis
Knudsen’s law and random billiards in irrational triangles.
Nonlinearity 26 (2013) 369-388
K. Dingle, J. Lamb, and J.A. Lazaro-Cami
See also my Google Scholar page and ResearchGate
Submitted (2025)
K. Dingle, B. Hamzi, M. Hutter, H. Owhadi
Bounding phenotype transition probabilities via conditional complexity
Submitted (2024)
K. Dingle, P. Hagolani, R. Zimm, M. Umar, S. O'Sullivan, A. Louis
Exploring simplicity bias in 1D dynamical systems
Entropy 26(5) 426 (2024)
K. Dingle, M. Alaskandarani, B. Hamzi, A. Louis
Simplicity bias, algorithmic probability, and the random logistic map
Physica D: Nonlinear Phenomena 134160 (2024)
B. Hamzi and K. Dingle
Bounds on learning with power-law priors
Bulletin of the American Physical Society (2024)
S. Ridout, I. Nemenman, A. Louis, C. Mingard, R. Grabarczyk, K. Dingle, G. Valle Pérez, C. London
Is evolution predictable?
The ScienceBreaker (2023)
K. Dingle
[This is a "popular science" article, aimed at the general public]
Maximum mutational robustness in genotype-phenotype maps follows a self-similar blancmange-like curve
Journal of the Royal Society Interface 20:204 (2023)
V. Mohanty, S. Greenbury, T. Sarkany, S. Narayanan, K. Dingle, S. Ahnert, and A. Louis
See also this Phys.org coverage of the paper
Nature favors simplicity and symmetry in biological forms
The ScienceBreaker 9 (2) (2023)
K. Dingle
[This is a "popular science" article, aimed at the general public]
Low complexity, low probability patterns and consequences for algorithmic probability applications
Complexity 9696075 (2023)
M. Alaskandarani and K. Dingle
Multiclass classification utilising an estimated algorithmic probability prior
Physica D: Nonlinear Phenomena 133713 (2023)
K. Dingle, P. Batlle, H. Owhadi
Random and natural non-coding RNA have similar structural motif patterns
but differ in bulge, loop, and bond counts
Life 13(3), 708 (2023)
F. Ghaddar and K. Dingle
Quantitative Analyses of Cytokine Profiles Reveal Hormone-Mediated Modulation
of Cytokine Profiles in Recurrent Spontaneous Miscarriage
Cytokine 164:156160 (2023)
K. Dingle, O. Kassem, F. Azizieh, G. AbdulHussain, R. Raghupathy
A Note on A Priori Forecasting and Simplicity Bias in Time Series
Physica A: Statistical Mechanics and its Applications 128339 (2023)
K. Dingle, R. Kamal, B. Hamzi
Predicting phenotype transition probabilities via conditional
algorithmic probability approximations
Journal of the Royal Society Interface 19:20220694 (2022)
K. Dingle, J. Novev, S. Ahnert, A. Louis
Fitness, Optima, and Simplicity
preprint (2022)
K. Dingle
Optima and Simplicity in Nature
preprint (2022)
K. Dingle
Reply to Ocklenburg et al: The interplay of developmental bias and natural selection
Proceedings of the National Academy of Science (PNAS) 119:28 (2022)
I. G. Johnston, K. Dingle, S. F. Greenbury, C. Q. Camargo, J. P. K. Doye, S. Ahnert, A. A. Louis
Symmetry and simplicity spontaneously emerge from the algorithmic nature of evolution
Proceedings of the National Academy of Science (PNAS) 119:11 (2022)
I. G. Johnston*, K. Dingle*, S. F. Greenbury, C. Q. Camargo, J. P. K. Doye, S. Ahnert, A. A. Louis
*= co-first authors
See also Oxford summary of the paper, and ScienceDaily, the New York Times, and Le Monde (in French), Editor's pick for Nature Reviews Physics
Phenotype bias determines how RNA structures occupy the morphospace of all possible shapes
Molecular Biology and Evolution Volume 39, Issue 1, msab280 (2022)
K. Dingle, F. Ghaddar, P. Sulc, A. A. Louis
Mechanistic modelling of COVID-19 and the impact of lockdowns on a short timescale
PLoS ONE 16(10):e0258084 (2021)
D. Ahmed, A. Ansari, M. Imran, K. Dingle, N. Ahmed, M. Bonsall
CytokineExplore: An online tool for statistical analysis of cytokine concentration datasets
Journal of Inflammation Research (2020) 13:401 - 410
O. Kassem, A. Al-Saleh, F. Azizieh, K. Dingle
*New* link to CytokineExplore tool website
Generic predictions of output probability based on complexities of inputs and outputs
Scientific Reports (Springer Nature) (2020) 10:4415
K. Dingle, G. Valle Perez, A. A. Louis
Multivariate comparison of cytokine profiles for normal and low bone density subjects
Diagnostics (2019) 9(4)
K. Dingle and F. Azizieh
Establishing a many-cytokine signature via multivariate anomaly detection
Scientific Reports (Springer Nature) (2019) 9:9684
K. Dingle, A. Zimek, F. Azizieh, A.R. Ansari
Input-output maps are strongly biased towards simple outputs
Nature Communications (2018) 9(761)
K. Dingle, C. Camargo, A. A. Louis
See also news article in Phys.org and Oxford blog post on simplicity bias
and Nature Physics commentary
Multivariate study of cytokine profiles in pregnancy complications
The American Journal of Reproductive Immunology (2018) 79(3) e12818
F. Azizieh, K. Dingle, K. Johnson, J. VanderPlas, R. Raghupathy, A. R. Ansari
(This paper was in the journal's top 20 downloaded articles)
Patterns of circulatory and peripheral blood mononuclear cytokines in rheumatoid arthritis
Rheumatology International (2017) 37(10), 1727-1734
F. Azizieh, K. Al Jarallah, D. Shehab, R. Gupta, K. Dingle, R. Raghupathy
(See also in BSR Rheumatology Conference (link))
Association of self-reported symptoms with serum levels of vitamin D and multivariate cytokine profile in healthy women
Journal of Inflammation Research Volume 2017:10 Pages 19-28
F. Azizieh, K. Alyahya, K. Dingle
The structure of the genotype-phenotype map strongly constrains the evolution of non-coding RNA.
Interface Focus (2015) 5 20150053
K. Dingle, S. Schaper and A. A. Louis
DPhil (PhD) thesis, Oxford University (2014)
Title: Probabilistic bias in genotype-phenotype maps
Keywords: information theory, biological evolution, mathematical biology, probability
Thesis supervisor: Ard A. Louis
Correlation of automorphism group size and topological properties with program-size complexity evaluations of graphs and complex networks.
Physica A: Statistical Mechanics and its Applications (2014) 404, 341-358
H. Zenil, F. Soler-Toscano, K. Dingle and A.A. Louis
Knudsen’s law and random billiards in irrational triangles.
Nonlinearity 26 (2013) 369-388
K. Dingle, J. Lamb, and J.A. Lazaro-Cami
See also my Google Scholar page and ResearchGate